Protein ZmALF4
ZmALF4 is a protein in the Alfin-like family.
Information
TF Name: ZmALF4
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF4
Uniprot ID: C0HHE4
Subgenome: 2

Protein ZmALF4

ZmALF4 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb138270_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d041767DAPseq no logo sequence fimo position
Zm00001d041767DAPseq no logo sequence fimo position
Zm00001d041767ChIPseq no logo sequence fimo position
Zm00001d041767PChIPseq no logo sequence fimo position

Interactions where ZmALF4 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF4 is the target  
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There are 126 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb138270_T001 from maize genome v5

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
PF00628
Alfin-like
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Nucleotide Sequence
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AGGGTCAATGGTGTGCCAGATAGGC...

GRMZM2G153087_T01 from maize genome v3


Related TFome: pUT6507

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

Nucleotide Sequence
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AGGGTCAATGGTGTGCCAGATAGGC...

GRMZM2G153087_T02 from maize genome v3

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRYSICFILR

Nucleotide Sequence
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AGGGTCAATGGTGTGCCAGATAGGC...

Zm00001d041767_T001 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

Nucleotide Sequence
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GAGAGAAGTCTTCTCTGTCACAGCG...

Zm00001d041767_T002 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESSHLLVVACRKRLFTMINNLPSIYEVVTGTAKKEPKE
KTPKSNIKTNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVK
ITPAKADHIKQYKCPSCTGSKRAKV

Nucleotide Sequence
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CGAGAGAAGTCTTCTCTGTCACAGC...

Zm00001d041767_T003 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRYSICFILR

Nucleotide Sequence
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CTTCTCAATTCCTTCCAATCGGCAC...

Zm00001d041767_T004 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPNETWEINLPAEEVPPELPEPA
LGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIK
TNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

Nucleotide Sequence
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CGAGAGAAGTCTTCTCTGTCACAGC...

Zm00001d041767_T005 from maize genome v4

Amino Acid Sequence
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MINNLPSIYEVVTGTAKKEPKEKTPKSNIKTNKSGSKPSRHAEPNSRVPKMPPPKDEESEEEEGEPQEDQESALCGACGL
GYDDFWICCDLCETWFHGKCVKITPAKADHIKQYKCPSCTGSKRAKV

Nucleotide Sequence
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GAGAGAAGTCTTCTCTGTCACAGCG...


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